Insertion junction: CLIP2.060903_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060903
Chromosome:chromosome 6
Location:5164093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGACACGCAATGCATCGCATCAAGCCTCGACGTTATCGGGCGCGTGT
Internal bar code:CTAGATTTTATTCGTACAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGTGTCGTCACTGTCTC
Suggested primer 2:AACGTCTCCTGTTTCGGCAT