Insertion junction: CLIP2.060908_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060908
Chromosome:chromosome 12
Location:1370728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489000 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATAATTAGTATGGAATGACTAGCGTTTGGACAGCTAGGACGCGCGCCC
Internal bar code:ATGATTGGCAAGTCCGTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAAACGGTTGTCGACC
Suggested primer 2:CTCATCCTCGTTACTCCCGC