Insertion junction: CLIP2.060909_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060909
Chromosome:chromosome 8
Location:262059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358563 (1 of 1) PTHR18934:SF85 - FI05376P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCACGTAACACATACGGCACTCTGCCCTGCGCGCTTCTCTCCTCTTCC
Internal bar code:GTTAAGGGTCAGAACCGAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACACGATTGGAGGAAGG
Suggested primer 2:CGTAAGTAGGCATCGCGAGT