Insertion junction: CLIP2.060910_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060910
Chromosome:chromosome 13
Location:3129367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584750 NDUFAF5,SMM46 (1 of 1) K18162 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-] (NDUFAF5); NADH:ubiquinone oxidoreductase 1 alpha subcomplex assembly factor 5 3'UTR
Cre13.g584800 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGAGCCACTAGCTTGAGCTTGGACAACCCCAATGCTCCTAAGCGCG
Internal bar code:ATGCAGGGGAAAGTGGGAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGGTGAATGCATCATCAC
Suggested primer 2:GGTGACGACCGGTAAACAGT