Insertion junction: CLIP2.060921_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060921
Chromosome:chromosome 3
Location:8782545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207265 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCTCCACCGCAGCCGCCACATCTTCCTATGACCAAACTCCGTCCTT
Internal bar code:CAGGGGCTAGGCTGTGCCACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:2.10526
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:93
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCTCTTTGGGGTGAG
Suggested primer 2:GGGAGAAGGTCGGTGAACAG