Insertion junction: CLIP2.060921_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060921
Chromosome:chromosome 3
Location:8782548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207265 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTTGTCGGATGCATTGTACCAGCAGACACGCAAGTGATGGCGCTAG
Internal bar code:CAGGAATATCGGGGTGGCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4045
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGAAGGTCGGTGAACAG
Suggested primer 2:CAGGAGCTCTTTGGGGTGAG