Insertion junction: CLIP2.060924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060924
Chromosome:chromosome 7
Location:4481591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343500 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCGTAATGCGCTAATGCAAAGCAGAGCCAAGTGGCCTTTTTGAGCGC
Internal bar code:TTGGGGCAGTTTTGTACACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTGAGTGTGGAGGTGCC
Suggested primer 2:GCCTCCCAGTCCTGTACCTA