Insertion junction: CLIP2.060926_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060926
Chromosome:chromosome 16
Location:5736488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCATAACACTTTTGCTCAGCAAGATAGTCAATCGACACAATACCTCA
Internal bar code:TGTTTGAACCTAGTTCTCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCGTACGAGCAGTAGG
Suggested primer 2:GGATGCCACAGCCCTAAACT