Insertion junction: CLIP2.060930_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060930
Chromosome:chromosome 16
Location:1768857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654992 (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGCTGTGGATTTTACCAGCGAGGGCTGCGCTGCGGAGGGGAAGACC
Internal bar code:ACATACTTCCATTTTTTACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5506
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGTCGTTCTGCGCTTG
Suggested primer 2:ACCAACAACAACAGCCAGGA