Insertion junction: CLIP2.060930_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060930
Chromosome:chromosome 16
Location:1768865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654992 (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACCAGGGCAAAGCGTGATGCGATGCTGCAATTTGTCCCTCACACAT
Internal bar code:GATGGCGAGGGCGTCAGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2523
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACAACAACAGCCAGGA
Suggested primer 2:TTTGTGTCGTTCTGCGCTTG