Insertion junction: CLIP2.060931_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060931
Chromosome:chromosome 16
Location:7582406
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g684155 (1 of 1) K11271 - sister chromatid cohesion protein DCC1 (DSCC1, DCC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGCGCCATCCAGGTGCCGGGCCAGTCGGCCGAGGCAGTGCTGCTGC
Internal bar code:GTGCTCCGTATGATTATCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:997
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGTCTAGGCAGGCATGA
Suggested primer 2:TCCATTTTGCGCACAAGGTG