Insertion junction: CLIP2.060935_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060935
Chromosome:chromosome 12
Location:59495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483720 (1 of 2) PTHR10302//PTHR10302:SF8 - SINGLE-STRANDED DNA-BINDING PROTEIN // PROTEIN OSB2, CHLOROPLASTIC-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTACCGCGGCCGATCGGGGAGGCCGGGCTGGGCCGGGTTGGTCTGAA
Internal bar code:GGCTTAAGACGCGTAATTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGGTAACAGACGTGGC
Suggested primer 2:CCACCTCGTCACTCAACTCC