Insertion junction: CLIP2.060945_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060945
Chromosome:chromosome 2
Location:2544658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092451 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGACAAGAGGGAAAGTCCGAGCCTCCTTTTCTTGGTGTGCTAAGCGTT
Internal bar code:GTTTTGAATTGTCCTCCGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3758
LEAP-Seq percent confirming:98.8764
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCGGTGCAAAACATGTT
Suggested primer 2:GGAGGCACATCTCTCGCTAC