Insertion cassette: | CIB2 |
Side of cassette: | 3' |
Strand: | + |
Strain: | CLIP2.060951 |
Chromosome: | chromosome 12 |
Location: | 3429641 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre12.g497650 | THY28 | Predicted protein; (1 of 1) PF01878 - EVE domain (EVE) | 3'UTR |
Cre12.g497652 | (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN | 5'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | AATCCATAAGTATCTGCAAAACTTTAAGTGTAAGCACGTGAACTGAGCAA |
Internal bar code: | GGACTCAGTTCTCATCAGCAAT |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1815 |
LEAP-Seq percent confirming: | 95.8333 |
LEAP-Seq n confirming: | 23 |
LEAP-Seq n nonconfirming: | 1 |
LEAP-Seq n unique pos: | 24 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | ATTACACCCTCCCTCCCCTC |
Suggested primer 2: | AATACTACGACGAGCGCAGG |