Insertion junction: CLIP2.060951_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060951
Chromosome:chromosome 12
Location:3429650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497650 THY28 Predicted protein; (1 of 1) PF01878 - EVE domain (EVE) 3'UTR
Cre12.g497652 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGATTAAAATTCGGTAAGGGGCCATGGCTGATAAATGAGTGATTCC
Internal bar code:GGAAGCTTACGCGAGTGCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AATACTACGACGAGCGCAGG
Suggested primer 2:ATTACACCCTCCCTCCCCTC