Insertion junction: CLIP2.060953_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060953
Chromosome:chromosome 16
Location:1157913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650300 HTR39,HTR25 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTCGGCCTGTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGC
Internal bar code:TTGTGAAGTGCGATTGACTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1879
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACGCCATGTCAGCTG
Suggested primer 2:TGTGTAAGTGACCGAGTCGC