Insertion junction: CLIP2.060954_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060954
Chromosome:chromosome 3
Location:1343950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATCTGTGCGGACTGCTCTCCAAGCACAATTACATGTCGTGTGACAAG
Internal bar code:GTCTAACTAGGGTACGAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGAGCGTGTGGACACT
Suggested primer 2:AGAAGGAGACGTTCTGCTGC