Insertion junction: CLIP2.060957_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060957
Chromosome:chromosome 9
Location:4108272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399252 3'UTR
Cre09.g399289 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCGAGTGACAAGGGTGCTGAGGCAATGGAACAGCCCTACTGCAGTTC
Internal bar code:GGTTTTTGAAAATTTGGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2835
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ACATACAGGCTATGCTCCGC
Suggested primer 2:GGCAATGAGGGCAAACGTTT