Insertion junction: CLIP2.060964_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060964
Chromosome:plastome
Location:171312
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802327 2716959,atpI,ChreCp062 ATPase IV subunit; (1 of 1) K02108 - F-type H+-transporting ATPase subunit a (ATPF0A, atpB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTAAAGTTTTGGAAACCATCAGGAGTTGATTTTAAATTGCTATTTCC
Internal bar code:GGCACATCACTGGACCGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2665
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAAACTGTGAGGCTG
Suggested primer 2:GCACCCGCTAAAGTTGCAAA