Insertion junction: CLIP2.060966_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060966
Chromosome:chromosome 6
Location:2015144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265300 CSS2 Chlamydomonas specific family S protein; (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGTATCACGTACTACAAGTCGCATCTAAAACCAAAGCAGCTGTCTTGC
Internal bar code:TGTTAAATAGACGTAAGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1685
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACCCTGTCCATCTCCGA
Suggested primer 2:CAACCCAACACAATGGCTGG