Insertion junction: CLIP2.060981_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060981
Chromosome:chromosome 13
Location:4053802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGAACAAGATGGCCGGCCGTGGCAAGGGCAAGACCTCTGGCAAGAA
Internal bar code:TGACATTCTGGACTGTCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2204
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCAGGTTGGCACTACC
Suggested primer 2:TCCTTGGCAGCCTTCTTAGC