Insertion junction: CLIP2.060981_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060981
Chromosome:chromosome 13
Location:4053805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAAGGGAGATTCAGGAAATTGGGGGATCCGAGTTGGAGCGCAGGAGG
Internal bar code:TGACATTCTGGACTGTCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGCAGCCTTCTTAGC
Suggested primer 2:AGAAGCAGGTTGGCACTACC