Insertion junction: CLIP2.060982_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060982
Chromosome:chromosome 17
Location:2119408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711650 NUD1,NUDC1,NUDC (1 of 4) IPR007052//IPR008978 - CS domain // HSP20-like chaperone; Nuclear distribution/movement family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCCGCAGCTGGGCCCCGCACCCTCGTCAACCCGAGAGCGGCAACAA
Internal bar code:CGATTGGTTTTTAGTACTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4265
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGGCCAAACGGTGAAC
Suggested primer 2:TTGAAGGGATAGGGAGCGGA