Insertion junction: CLIP2.060996_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060996
Chromosome:chromosome 5
Location:2794023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240950 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCTCCTGAGGAGCCCACCACGGCTCTATCCCGCAGCTTCCGTACATC
Internal bar code:GGATAGGGCGAAAAGTGCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3584
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGAGGGAGCACGAGA
Suggested primer 2:ACGCACGTACGTATGGCTAG