Insertion junction: CLIP2.060999_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060999
Chromosome:chromosome 6
Location:3353137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800655 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGGGCACCTGGAGGCGGCAGCACGAGTGTACGGCACCCGCGCTCGCG
Internal bar code:TTGAACCTTGCTTTGGGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2457
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TACCACGACGATGGGCAAAA
Suggested primer 2:ACTACGAGATCCTGCTGGGT