Insertion junction: CLIP2.061001_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061001
Chromosome:chromosome 16
Location:3765077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684861 (1 of 781) IPR000104 - Antifreeze protein, type I CDS
Cre16.g685217 NUP58 Nucleoporin 58; (1 of 1) K14307 - nucleoporin p58/p45 (NUPL1, NUP49) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGAACACATCTCGCTACGTATTGGGTTCTGCCTAAGCTGCGAGTG
Internal bar code:AGTTTCAGTTTTAGGGAGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCTGACAGGGGTAGGAT
Suggested primer 2:GTGCAGGTTTGACGCAACAT