Insertion junction: CLIP2.061005_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061005
Chromosome:chromosome 6
Location:1669397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262250 AP1M1 (1 of 1) K12393 - AP-1 complex subunit mu (AP1M); Mu1-Adaptin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCATTCAATTTTCCAGCGCAATGAGCCTGGACCGAAGTCAACCCTGTC
Internal bar code:TTCAATTCGTAATATATCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATCAGCGCTGTCGAAAG
Suggested primer 2:GCTCCACACAACTGCCTAGT