Insertion junction: CLIP2.061008_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061008
Chromosome:chromosome 6
Location:1704536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262500 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCTTCAGACGGCGCGTGCGGTTGGCCCTGCGACAGACTTGCGTTGCG
Internal bar code:TATTTCGTTATCATACACCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4028
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGTGGCTTACTTGCAGC
Suggested primer 2:CGGCAGGTGAAGGGTTACAT