Insertion junction: CLIP2.061009_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061009
Chromosome:chromosome 6
Location:96041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCCGGACGGCACCGGGTTTCGTTAGGGCGGTGACATGCTAGGACGT
Internal bar code:CTCACACAGCCCATGATGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGCCGCGTGTAACATTC
Suggested primer 2:GAGCTCCGTGTGAAGGTCAA