Insertion junction: CLIP2.061009_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061009
Chromosome:chromosome 6
Location:96043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTCCATAGCCGCGGTGATGCACAGTGTTACAGCAGCTGCTGATGCCC
Internal bar code:CTCACACAGCCCATGATGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2938
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCCGTGTGAAGGTCAA
Suggested primer 2:GTACGCCGCGTGTAACATTC