Insertion junction: CLIP2.061011_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061011
Chromosome:chromosome 11
Location:3320806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476600 (1 of 5) IPR006094//IPR016166 - FAD linked oxidase, N-terminal // FAD-binding, type 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCATGGCTTCATGGAAATGCACCTTCCCAATCCCTCAAGCAGCGTTTC
Internal bar code:TCTCCCTTCCAGCGTGGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2034
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGGGCATGCCTACTCGC
Suggested primer 2:ATCCTCCAGTCCTAGGCGTT