Insertion junction: CLIP2.061018_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061018
Chromosome:chromosome 13
Location:678613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566300 RRM12,RSMD (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase; Putative rRNA (guanine-N2-)-methyltransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAGGACTGGGTCTGGAGGACCTGGGGCTGGGTCCGGCTGTTGGGCGA
Internal bar code:GTCGTTGGTTTCCGATCATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4691
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCTCGTGCCTCAACCAC
Suggested primer 2:GCAATGCCAAACTGTGAGCA