Insertion junction: CLIP2.061019_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061019
Chromosome:chromosome 13
Location:1376587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571750 (1 of 1) PTHR10050 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAATCGCTCGCCCCACGGTATCTCCTCCTGCTAGACCACTCCCCTCC
Internal bar code:TAGGTGACCTGCTGGGGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5695
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGGTGACACTACTGCGA
Suggested primer 2:CCTCTTCAACTGCGTCCTGT