Insertion junction: CLIP2.061023_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061023
Chromosome:chromosome 1
Location:2937536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018350 3'UTR
Cre01.g018400 ITPK2,IPK (1 of 2) K00913 - inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase (ITPK1); Inositol 1%252C3%252C4-trisphosphate 5/6-kinase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCTCAAACTGAAGGCGTTCCCAGTTGTTCCTCAAAAGCCTCTCCCT
Internal bar code:GCTCTTTGGGCTAAAGCGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2331
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCCTCTGGGATCCCCTC
Suggested primer 2:GCAGGTTGCGTCACATGTTT