Insertion junction: CLIP2.061028_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061028
Chromosome:chromosome 2
Location:6725554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387541 (1 of 33) IPR015797 - NUDIX hydrolase domain-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAAATGTATGCAGGCATGCGCGATGCAATTGCACGCGAAGCGGCCA
Internal bar code:ATATAAGAACAGAAACGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGAACTTGGCACACTTG
Suggested primer 2:ATGACACCCTTACCTGCTGC