Insertion junction: CLIP2.061034_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061034
Chromosome:chromosome 8
Location:1620249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365750 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCTATATTAGCCATCGGACTACGCCAACCTGCCCGTTAGCCTATCC
Internal bar code:CCTATTTAGGCTAAAAACGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGGCCAAATTAGATGTG
Suggested primer 2:TGGTCGTCTGAGGCAGAAAC