Insertion junction: CLIP2.061042_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061042
Chromosome:chromosome 9
Location:4598026
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g401515 (1 of 1) IPR017927//IPR017938 - Ferredoxin reductase-type FAD-binding domain // Riboflavin synthase-like beta-barrel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACAGCCCATACTGCAGCAGCTCCATCGCCCGCCCCGCGTCCAGCTGC
Internal bar code:AGGAATTGGTGAACATAGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:304
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCTCCCACCTAACTCC
Suggested primer 2:CGTAGGCGGCACTTAGGTAG