Insertion junction: CLIP2.061043_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061043
Chromosome:chromosome 12
Location:1633706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801368 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGAAGAGGGGCCCGAATGTGTACGACAATTGTGGCGGGCAGGCCGAAT
Internal bar code:AGATGTGGCTACTCTAGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1460
LEAP-Seq percent confirming:25.8065
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGGAATGGACGCCTGA
Suggested primer 2:AGACAAGTGTAGTGGGCACG