Insertion junction: CLIP2.061046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061046
Chromosome:chromosome 12
Location:9461961
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g540750 (1 of 1) PF05608 - Protein of unknown function (DUF778) (DUF778) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACACACGGGCTTTGCTCGCGCGCTCCGGCGGACCCAATCCACAGCT
Internal bar code:GCTGACTCCAGCAGGGATTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGACTGTTACGGTCGGG
Suggested primer 2:AAGACCGGCACAACCTACTG