Insertion junction: CLIP2.061048_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061048
Chromosome:chromosome 16
Location:3704234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680232 (1 of 1) PTHR12509:SF8 - SPERMATOGENESIS-ASSOCIATED PROTEIN 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCACCCCTGCAAATCCGCAGCTGCCAACGCAGCTACAGGATGCGCGC
Internal bar code:GTTAAAGTACTTGGCGCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1637
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTTGAGCCTTCACCGCAG
Suggested primer 2:TGTCAGCAAAAGAACGCAGC