Insertion junction: CLIP2.061049_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061049
Chromosome:chromosome 16
Location:5116602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685500 (1 of 2) IPR006652//IPR011043 - Kelch repeat type 1 // Galactose oxidase/kelch, beta-propeller 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTCGGGCATATGCTGTAACCCAGCTACTCGGCCCACACCGCGACGT
Internal bar code:AATTCAGGAGTAGGTTAGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4818
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCATTACAGTCGCATG
Suggested primer 2:GTTTGGAGGGGTGTATGGGG