Insertion junction: CLIP2.061050_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061050
Chromosome:chromosome 3
Location:2101869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGCATACACGGCTTGCCTTTCCCACCTTTACAAACTGTAAAAAACA
Internal bar code:TCGGGTTATTCCCGGCTACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2571
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGTTGGTTGCGGAGG
Suggested primer 2:CATTTGGCACTGTGGGTGTG