Insertion junction: CLIP2.061061_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061061
Chromosome:chromosome 3
Location:9113834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200991 (1 of 1) K15262 - protein BCP1 (BCP1, BCCIP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGGCGCCAGGTGCCATGGCTTCGTCGTGATTGCTTCAACTGTAAGC
Internal bar code:ATATACCTGCGCCTTTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:62.069
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TAATAGCTACCTGGTGCGCG
Suggested primer 2:TACCTCAAAAGTGCCCACCC