Insertion junction: CLIP2.061068_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061068
Chromosome:chromosome 3
Location:5676099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTTACCGGGAAGGTTCACAGCCCCCGAGCACAGTACCAATGGGAACC
Internal bar code:GTCCTTATCTAAATCAATGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3846
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAGCTTCTGGTGACTTT
Suggested primer 2:ACATGCAGAACTCCACTCCG