Insertion junction: CLIP2.061072_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061072
Chromosome:plastome
Location:32966
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802283 rps4,ChreCp020,2716955 30S ribosomal protein S4; (1 of 1) PTHR11831:SF4 - 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGTGTAAACCAAAAGATGTTATTTCTGTAGCAATGAAACAACGTTCG
Internal bar code:TAATTTGAAGAGTCGCGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:318
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACTGACGTCCACTAAT
Suggested primer 2:TGCCAAGGAAAATGTTGCGG