Insertion junction: CLIP2.061084_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061084
Chromosome:chromosome 4
Location:1800958
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g211600 snRK1,CKIN1,SNF1,SNRK1A (1 of 1) PTHR24343//PTHR24343:SF183 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTGTGGTTGTGGATGGTCGCACGTGCACACCTTGTATCGCTGTCAC
Internal bar code:ACCCATGTGAGGATAAGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACAGCACGAGACATGAG
Suggested primer 2:CCACTCACCACTCACTCACC