Insertion junction: CLIP2.061089_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061089
Chromosome:chromosome 14
Location:2334667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g622951 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGATGGACGCCCGCCGCCTTGATTGCCGCCGCTTTCCCTTTCTACTG
Internal bar code:ATAACTTTAACAGGTCCCTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATAGAGGCGCAACTCTC
Suggested primer 2:TTTGTGCTTCTTGTCGCAGC