Insertion junction: CLIP2.061093_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061093
Chromosome:chromosome 2
Location:5600530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115450 CYG47 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCATGTATGTGCTGGGTGCGGGCCGTTTGCGGGGCTGAGAAGGAGATG
Internal bar code:TTCCTAACGCCAAAGCGCAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2957
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCGCCAACTGAGATGAA
Suggested primer 2:GCAGCAAACACTCACTGGTG