Insertion junction: CLIP2.061094_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061094
Chromosome:chromosome 1
Location:4304993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029200 DIV30,ESP1 Separase, cell cycle protease; (1 of 1) 3.4.22.49 - Separase / Separin outside_mRNA
Cre01.g029250 AAH1 Aromatic amino acid hydroxylase-related protein; (1 of 1) PF00351 - Biopterin-dependent aromatic amino acid hydroxylase (Biopterin_H) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCGTCTGTCCAGGGGTCTGTCACACCTGGCCACGCCTGTGACAGCA
Internal bar code:TGTGTGCATAGAACTTAGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCTTGTGGCTTTGTGC
Suggested primer 2:GGTTTCGGGTTCTGCGTTTC