Insertion junction: CLIP2.061096_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061096
Chromosome:chromosome 9
Location:5967617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412250 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCCGGCTGCTGTGGCGAGATACACACCGGCAGCATGTACCACCCCCC
Internal bar code:GTTTCCGCGGATCTATTGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:263
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCATGTGTGTCCGTAAGT
Suggested primer 2:TCCATCCGCAAAGACCGAAA